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licR transcriptional activator of the lichenan operon [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937383, updated on 6-Oct-2023

Summary

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Gene symbol
licR
Gene description
transcriptional activator of the lichenan operon
Locus tag
BSU_38600
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU38600
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Genomic context

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Sequence:
NC_000964.3 (3962003..3963928, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene phosphotransferase system (PTS) lichenan-specific enzyme IIC component Neighboring gene phosphotransferase system (PTS) lichenan-specific enzyme IIB component Neighboring gene hypothetical protein Neighboring gene 3-alkylated purines and hypoxanthine DNA glycosidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
transcriptional activator of the lichenan operon
NP_391739.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 8990303, 9353933, 10438772; Product type r: regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3962003..3963928 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391739.1 transcriptional activator of the lichenan operon [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391739.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1IBF3
    Conserved Domains (2) summary
    COG3711
    Location:1 → 503
    BglG; Transcriptional antiterminator [Transcription]
    pfam00359
    Location:501 → 637
    PTS_EIIA_2; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P46321.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials