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slrC transcriptional regulator of slrA (biofilm formation) [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937314, updated on 6-Jun-2024

Summary

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Gene symbol
slrC
Gene description
transcriptional regulator of slrA (biofilm formation)
Locus tag
BSU_38220
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU38220
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Genomic context

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Sequence:
NC_000964.3 (3922292..3922963, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene galactokinase Neighboring gene putative cell wall glycosylation protein Neighboring gene anti-repressor of SlrR Neighboring gene subunit of acetate transporter as a volatile signal for biofilm formation Neighboring gene acetate Na+-dependent symporter subunit involved in volatile signal for biofilm formation

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
transcriptional regulator of slrA (biofilm formation)
NP_391701.2
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 18647168; Product type r: regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3922292..3922963 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391701.2 transcriptional regulator of slrA (biofilm formation) [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391701.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1KCJ2
    Conserved Domains (1) summary
    pfam00440
    Location:18 → 63
    TetR_N; Bacterial regulatory proteins, tetR family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P39601.2

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases