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vbfB subunit of acetate transporter as a volatile signal for biofilm formation [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937304, updated on 6-Oct-2023
Gene symbol
vbfB
Gene description
subunit of acetate transporter as a volatile signal for biofilm formation
Locus tag
BSU_38230
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU38230
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Sequence:
NC_000964.3 (3923920..3924228)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene transcriptional regulator of slrA (biofilm formation) Neighboring gene anti-repressor of SlrR Neighboring gene acetate Na+-dependent symporter subunit involved in volatile signal for biofilm formation Neighboring gene putative sulfur oxido-reductase Neighboring gene peroxidase converting ferric iron into ferrous iron

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
subunit of acetate transporter as a volatile signal for biofilm formation
NP_391702.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 26060272, 28357266; Product type t: transporter

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391702.1 subunit of acetate transporter as a volatile signal for biofilm formation [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391702.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1IBC2
    Conserved Domains (1) summary
    COG3162
    Location:1 → 99
    YjcH; Uncharacterized membrane protein, DUF485 family [Function unknown]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P39600.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases