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rmgT putative dehydrogenase of rhamnogalaturonan degradation [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937274, updated on 6-Oct-2023
Gene symbol
rmgT
Gene description
putative dehydrogenase of rhamnogalaturonan degradation
Locus tag
BSU_30100
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU30100
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Sequence:
NC_000964.3 (3079333..3080619, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene conserved sporulation-related protein Neighboring gene putative membrane enzyme for rhamnogalaturonan degradation Neighboring gene lipoprotein required for rhamnogalaturonan transport and degradation Neighboring gene unsaturated rhamnogalacturonyl hydrolase Neighboring gene permease for unsaturated rhamnogalacturonan

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
putative dehydrogenase of rhamnogalaturonan degradation
NP_390888.1
  • Evidence 3: Putative function from multiple computational evidences; PubMedId: 17449691, 23504016; Product type e: enzyme

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3079333..3080619 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_390888.1 putative dehydrogenase of rhamnogalaturonan degradation [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_390888.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1IVN7
    Conserved Domains (2) summary
    COG0673
    Location:1 → 220
    MviM; Predicted dehydrogenase [General function prediction only]
    pfam02894
    Location:141 → 419
    GFO_IDH_MocA_C; Oxidoreductase family, C-terminal alpha/beta domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O34371.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials