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ytrF metabolite permease involved in resistance to cell wall inhibitors [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937247, updated on 3-Jul-2021

Summary

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Gene symbol
ytrF
Gene description
metabolite permease involved in resistance to cell wall inhibitors
Locus tag
BSU_30410
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU30410
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Genomic context

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Sequence:
NC_000964.3 (3113979..3115289, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene ABC transporter (permease) Neighboring gene bacitracin ABC efflux transporter (ATP-binding protein) Neighboring gene two-component sensor histidine kinase controlling resistance to antibiotics affecting the envelope [YtsA] Neighboring gene two-component response regulator controlling resistance to antibiotics affecting the envelope [YtsB] Neighboring gene ABC transporter (ATP-binding protein) involved in resistance to cell wall inhibitors Neighboring gene ABC transporter, permease component involved in resistance to cell wall inhibitors Neighboring gene ABC transporter, permease component involved in resistance to cell wall inhibitors Neighboring gene ABC transporter (ATP-binding protein) involved in resistance to cell wall inhibitors

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
metabolite permease involved in resistance to cell wall inhibitors
NP_390919.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 10986249, 15849754, 16850406, 17558661, 22926563; Product type t : transporter

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3113979..3115289 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_390919.1 metabolite permease involved in resistance to cell wall inhibitors [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_390919.1

    Status: PROVISIONAL

    Conserved Domains (2) summary
    cl30308
    Location:182 → 435
    LolE; ABC-type transport system, involved in lipoprotein release, permease component [Cell wall/membrane/envelope biogenesis]
    pfam12704
    Location:22 → 149
    MacB_PCD; MacB-like periplasmic core domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O35005.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases