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spsK putative dTDP-4-dehydrorhamnose reductase [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937225, updated on 6-Oct-2023

Summary

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Gene symbol
spsK
Gene description
putative dTDP-4-dehydrorhamnose reductase
Locus tag
BSU_37820
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU37820
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Genomic context

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Sequence:
NC_000964.3 (3883427..3884278, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene glutamate dehydrogenase Neighboring gene biofilm protein, member of the processed secretome contributing to biofilm hydrophobicity Neighboring gene putative dTDP-4-deoxyrhamnose-3,5-epimerase (cell surface and spore coat) Neighboring gene dTDP-glucose 4,6-dehydratase Neighboring gene glucose-1-phosphate thymidylyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

General protein information

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Preferred Names
putative dTDP-4-dehydrorhamnose reductase
NP_391661.3
  • Evidence 3: Putative function from multiple computational evidences; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3883427..3884278 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391661.3 putative dTDP-4-dehydrorhamnose reductase [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391661.3

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1KJ48
    Conserved Domains (1) summary
    COG1091
    Location:3 → 279
    RfbD; dTDP-4-dehydrorhamnose reductase [Cell wall/membrane/envelope biogenesis]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P39631.3

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases