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bacD alanine-anticapsin ligase [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937214, updated on 17-Dec-2024

Summary

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Gene symbol
bacD
Gene description
alanine-anticapsin ligase
Locus tag
BSU_37710
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU37710
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Genomic context

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Sequence:
NC_000964.3 (3870668..3872086, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene cyclohexenol-containing tetrahydro-4-hydroxyphenylpyruvate H(4)HPP in bacilysin synthesis Neighboring gene phenylalanine aminotransferase forming tetrahydrotyrosine in bacilysin synthesis Neighboring gene efflux protein for bacilysin excretion, self-protection against bacilysin Neighboring gene dihydroanticapsin 7-dehydrogenase Neighboring gene 3-((4R)-4-hydroxycyclohexa-1, 5-dien-1-yl)-2-oxopropanoate isomerase Neighboring gene prephenate decarboxylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Single mutation alters the substrate specificity of L-amino acid ligase. Tsuda T, et al. Biochemistry, 2014 Apr 29. PMID 24702628
  2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

General protein information

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Preferred Names
alanine-anticapsin ligase
NP_391651.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 15609023, 16030213, 18957859, 19061923, 22298000, 22407814, 24702628, 25261512, 25472439, 26284661; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3870668..3872086 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391651.1 alanine-anticapsin ligase [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391651.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5D4N629
    Conserved Domains (1) summary
    COG0439
    Location:3 → 472
    AccC; Biotin carboxylase [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P39641.1

Gene LinkOut

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Other Literature Sources
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Research Materials