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menD 2-oxoglutarate decarboxylase and 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937198, updated on 6-Oct-2023
Gene symbol
menD
Gene description
2-oxoglutarate decarboxylase and 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
Locus tag
BSU_30820
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU30820
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Sequence:
NC_000964.3 (3150563..3152305, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene O-succinylbenzoate-CoA synthase Neighboring gene O-succinylbenzoic acid-CoA ligase Neighboring gene dihydroxynapthoic acid synthetase Neighboring gene 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase Neighboring gene menaquinone-specific isochorismate synthase Neighboring gene putative regulatory protein Neighboring gene putative UTP-glucose-1-phosphate uridylyltransferase

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Structure and reactivity of Bacillus subtilis MenD catalyzing the first committed step in menaquinone biosynthesis. Dawson A, et al. J Mol Biol, 2010 Aug 13. PMID 20600129, Free PMC Article
  2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
2-oxoglutarate decarboxylase and 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
NP_390960.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 6780514, 8169214, 8566759, 12682299; Product type e: enzyme

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3150563..3152305 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_390960.1 2-oxoglutarate decarboxylase and 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_390960.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1IVW0
    Conserved Domains (1) summary
    COG1165
    Location:1 → 575
    MenD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [Coenzyme transport and metabolism]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P23970.3

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases