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ywhH putative tRNA editing enzyme [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937183, updated on 12-Feb-2021

Summary

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Gene symbol
ywhH
Gene description
putative tRNA editing enzyme
Locus tag
BSU_37480
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU37480
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Genomic context

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Sequence:
NC_000964.3 (3847348..3847821)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene factor interacting with DNA helicase PcrA Neighboring gene response regulator aspartate phosphatase anti-activator of ComA Neighboring gene secreted regulator of the activity of phosphatase RapF Neighboring gene agmatinase Neighboring gene spermidine synthase; polyamine metabolism

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
putative tRNA editing enzyme
NP_391628.1
  • Evidence 3: Putative function from multiple computational evidences; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391628.1 putative tRNA editing enzyme [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391628.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P71000
    Conserved Domains (1) summary
    cd04333
    Location:3 → 152
    ProX_deacylase; This CD, composed mainly of bacterial single-domain proteins, includes the Thermus thermophilus (Tt) YbaK-like protein, a homolog of the trans-acting Escherichia coli YbaK Cys-tRNA(Pro) deacylase and the Agrobacterium tumefaciens ProX Ala-tRNA(Pro) ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P71000.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases