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kapD putative exoribonuclease (3'-5') [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937171, updated on 12-Feb-2021

Summary

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Gene symbol
kapD
Gene description
putative exoribonuclease (3'-5')
Locus tag
BSU_31470
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU31470
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Genomic context

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Sequence:
NC_000964.3 (3231812..3232429, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene two-component sensor potassium-binding histidine kinase Neighboring gene factor required for KinB signal transduction and activation of the phosphorelay to sporulation Neighboring gene putative exporter induced in acid stress Neighboring gene penicillin-binding protein 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
putative exoribonuclease (3'-5')
NP_391025.1
  • Evidence 3: Putative function from multiple computational evidences; PubMedId: 27188294; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3231812..3232429 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391025.1 putative exoribonuclease (3'-5') [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391025.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O05231
    Conserved Domains (1) summary
    PRK07748
    Location:1 → 205
    PRK07748; 3'-5' exonuclease KapD
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O05231.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases