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xynC secreted endo-xylanase [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937052, updated on 12-Feb-2021

Summary

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Gene symbol
xynC
Gene description
secreted endo-xylanase
Locus tag
BSU_18150
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU18150
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Genomic context

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Sequence:
NC_000964.3 (1942714..1943982, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene endo-1,4-beta-glucanase Neighboring gene hypothetical protein Neighboring gene arabinoxylan arabinofuranohydrolase Neighboring gene putative conserved membrane protein possibly involved in arabinogalactan metabolism

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of XynC from Bacillus subtilis subsp. subtilis strain 168 and analysis of its role in depolymerization of glucuronoxylan. St John FJ, et al. J Bacteriol, 2006 Dec. PMID 17028274, Free PMC Article
  2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. XynC characterized with respect to substrate preference, kinetic properties, and product formation
    Title: Characterization of XynC from Bacillus subtilis subsp. subtilis strain 168 and analysis of its role in depolymerization of glucuronoxylan.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
secreted endo-xylanase
NP_389697.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 17028274, 25355936, 26559526, 28330222; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    1942714..1943982 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_389697.1 secreted endo-xylanase [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_389697.1

    Status: PROVISIONAL

    Conserved Domains (1) summary
    COG5520
    Location:1 → 422
    XynC; O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q45070.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases