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raeA ribosome-dependent mRNA endonuclease [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 936993, updated on 12-Feb-2021

Summary

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Gene symbol
raeA
Gene description
ribosome-dependent mRNA endonuclease
Locus tag
BSU_00970
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU00970
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Genomic context

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Sequence:
NC_000964.3 (116025..116537)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene serine O-acetyltransferase Neighboring gene dual cysteinyl-tRNA synthetase; cysteine persulfide synthase Neighboring gene ribonuclease for 23S RNA maturation, mini-RNase III Neighboring gene 23S rRNA (Gm2251)-methyltransferase Neighboring gene RNA polymerase sigma-30 factor (sigma(H)) Neighboring gene ribosomal protein L33

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
ribosome-dependent mRNA endonuclease
NP_387978.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 17114934, 23355615, 28363943; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_387978.1 ribosome-dependent mRNA endonuclease [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_387978.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P37574
    Conserved Domains (1) summary
    COG3688
    Location:1 → 169
    YacP; Predicted RNA-binding protein containing a PIN domain [General function prediction only]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P37574.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases