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alsR transcriptional regulator controlling alsSD, ictEP expression (LysR family) [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 936860, updated on 17-Dec-2024
Gene symbol
alsR
Gene description
transcriptional regulator controlling alsSD, ictEP expression (LysR family)
Locus tag
BSU_36020
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU36020
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Sequence:
NC_000964.3 (3711498..3712406)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene alpha-acetolactate decarboxylase Neighboring gene alpha-acetolactate synthase Neighboring gene putative Na+/H+ antiporter Neighboring gene hypothetical protein

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Purification, crystallization and preliminary X-ray analysis of the effector domain of AlsR, an LysR-type transcriptional regulator from Bacillus subtilis. Frädrich C, et al. Acta Crystallogr Sect F Struct Biol Cryst Commun, 2013 May 1. PMID 23695583, Free PMC Article
  2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. AlsR82-302S100A, representing the effector domain of the transcriptional regulator, is produced in Escherichia coli, purified and crystallized using the sitting-drop vapor-diffusion method.
    Title: Purification, crystallization and preliminary X-ray analysis of the effector domain of AlsR, an LysR-type transcriptional regulator from Bacillus subtilis.
Submit: New GeneRIF Correction

Homology

Preferred Names
transcriptional regulator controlling alsSD, ictEP expression (LysR family)
NP_391483.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 10809684, 10972805, 12363365, 15978075, 17183216, 7685336, 22178965, 23576037, 23695583, 23836140; Product type r: regulator

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391483.1 transcriptional regulator controlling alsSD, ictEP expression (LysR family) [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391483.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAX3RQU8
    Conserved Domains (2) summary
    cd08452
    Location:92 → 288
    PBP2_AlsR; The C-terminal substrate binding domain of LysR-type trnascriptional regulator AlsR, which regulates acetoin formation under stationary phase growth conditions; contains the type 2 periplasmic binding fold
    pfam00126
    Location:3 → 62
    HTH_1; Bacterial regulatory helix-turn-helix protein, lysR family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q04778.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases