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lytD exported N-acetylglucosaminidase (major autolysin) (CWBP90) [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 936822, updated on 6-Oct-2023

Summary

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Gene symbol
lytD
Gene description
exported N-acetylglucosaminidase (major autolysin) (CWBP90)
Locus tag
BSU_35780
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU35780
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Genomic context

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Sequence:
NC_000964.3 (3684826..3687468, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene teichoic acid primase, CDP-glycerol:N-acetyl-beta-d-mannosaminyl-1, 4-N-acetyl-d-glucosaminyldiphosphoundecaprenyl glycerophosphotransferase Neighboring gene putative polyglycerol phosphate assembly and export protein (teichoic acid biosynthesis) Neighboring gene mannose-6-phosphate isomerase (active on aldose substrates with hydroxyl groups oriented in the same direction at the C-2 and C-3 positions as in mannose) Neighboring gene component of germinant receptor B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
exported N-acetylglucosaminidase (major autolysin) (CWBP90)
NP_391459.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 9537764, 10206711, 17298895, 19542270, 22469514; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3684826..3687468 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391459.1 exported N-acetylglucosaminidase (major autolysin) (CWBP90) [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391459.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1KRN6
    Conserved Domains (2) summary
    COG4193
    Location:630 → 880
    LytD; Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism]
    pfam05036
    Location:232 → 306
    SPOR; Sporulation related domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P39848.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases