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ytcD putative transcriptional regulator (HxlR family) [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 936607, updated on 10-Oct-2024
Gene symbol
ytcD
Gene description
putative transcriptional regulator (HxlR family)
Locus tag
BSU_29030
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU29030
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Sequence:
NC_000964.3 (2968260..2968640, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene S-adenosylmethionine decarboxylase Neighboring gene glyceraldehyde-3-phosphate dehydrogenase (NADP-dependent, gluconeogenesis) Neighboring gene putative transporter Neighboring gene promiscuous aldo/keto reductase

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
putative transcriptional regulator (HxlR family)
NP_390781.1
  • Evidence 3: Putative function from multiple computational evidences; PubMedId: 23504016; Product type r: regulator

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    2968260..2968640 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_390781.1 putative transcriptional regulator (HxlR family) [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_390781.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O34533
    Conserved Domains (1) summary
    pfam01638
    Location:16 → 105
    HxlR; HxlR-like helix-turn-helix
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O34533.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials