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yvcJ GTPase possibly involved in regulator sRNA degradation [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 936532, updated on 12-Feb-2021

Summary

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Gene symbol
yvcJ
Gene description
GTPase possibly involved in regulator sRNA degradation
Locus tag
BSU_34770
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU34770
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Genomic context

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Sequence:
NC_000964.3 (3571501..3572388, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene putative morphogen Neighboring gene gluconeogenesis morphogenetic factor (UDP-sugar binding) Neighboring gene putative triphosphate pyrophosphate hydrolase Neighboring gene thioredoxin reductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of YvcJ, a conserved P-loop-containing protein, and its implication in competence in Bacillus subtilis. Luciano J, et al. J Bacteriol, 2009 Mar. PMID 19074378, Free PMC Article
  2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. findings show YvcJ binds and hydrolyzes nucleotides; data show that YvcJ positively controls the expression of late competence genes
    Title: Characterization of YvcJ, a conserved P-loop-containing protein, and its implication in competence in Bacillus subtilis.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
GTPase possibly involved in regulator sRNA degradation
NP_391357.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 18334534, 19074378, 21179021, 21709426; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3571501..3572388 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391357.1 GTPase possibly involved in regulator sRNA degradation [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391357.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O06973
    Conserved Domains (1) summary
    cl23728
    Location:9 → 292
    ATP_bind_2; P-loop ATPase protein family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O06973.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases