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yjdB putative exported protein; phage island [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 936431, updated on 12-Feb-2021
Gene symbol
yjdB
Gene description
putative exported protein; phage island
Locus tag
BSU_11990
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU11990
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Sequence:
NC_000964.3 (1269733..1270080, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene conserved hypothetical protein; phage island Neighboring gene putative acyl-carrier protein oxidoreductase; phage island Neighboring gene transcriptional DNA-binding activator Neighboring gene phosphotransferase system (PTS) mannose-specific enzyme IIBCA component

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
putative exported protein; phage island
NP_389081.1
  • Evidence 3: Putative function from multiple computational evidences; PubMedId: 16291680; Product type h: extrachromosomal origin

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    1269733..1270080 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_389081.1 putative exported protein; phage island [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_389081.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O31643
    Conserved Domains (1) summary
    pfam02368
    Location:37 → 114
    Big_2; Bacterial Ig-like domain (group 2)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O31643.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials