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yvdT putative transcriptional regulator (TetR/AcrR family) [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 936423, updated on 6-Aug-2024

Summary

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Gene symbol
yvdT
Gene description
putative transcriptional regulator (TetR/AcrR family)
Locus tag
BSU_34480
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU34480
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Genomic context

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Sequence:
NC_000964.3 (3540717..3541406)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene levansucrase; levanase (moonlighting) Neighboring gene endolevanase, selectively cleaves the (beta-2,6) fructosyl bonds Neighboring gene L-aspartate/L-glutamate / proton permease Neighboring gene sodium / proton antiporter subunit A Neighboring gene sodium-proton two component antiporter subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
putative transcriptional regulator (TetR/AcrR family)
NP_391328.2
  • Evidence 3: Putative function from multiple computational evidences; Product type r: regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391328.2 putative transcriptional regulator (TetR/AcrR family) [Bacillus subtilis subsp. subtilis str. 168]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAI8PX79
    Conserved Domains (2) summary
    pfam00440
    Location:47 → 93
    TetR_N; Bacterial regulatory proteins, tetR family
    pfam17934
    Location:119 → 226
    TetR_C_26; Tetracyclin repressor-like, C-terminal domain
Nucleotide Protein
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Other Literature Sources
Molecular Biology Databases