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sigL RNA polymerase sigma-54 factor (sigma-L) [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 936362, updated on 10-Oct-2024
Gene symbol
sigL
Gene description
RNA polymerase sigma-54 factor (sigma-L)
Locus tag
BSU_34200
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU34200
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Sequence:
NC_000964.3 (3512498..3513808, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene L-lactate utilization global transcriptional regulator (GntR family) Neighboring gene L-lactate permease Neighboring gene hypothetical protein Neighboring gene pyruvyl transferase for matrix biofilm formation Neighboring gene putative aminotransferase involved in biofilm matrix formation

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Genetic evidence that multiple proteases are involved in modulation of heat-induced activation of the sigma factor SigI in Bacillus subtilis. Liu TY, et al. FEMS Microbiol Lett, 2017 Apr 1. PMID 28333276
  2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. SigB appears to control sigI expression during heat stress via ClpC, ClpP and Spx
    Title: Genetic evidence that multiple proteases are involved in modulation of heat-induced activation of the sigma factor SigI in Bacillus subtilis.
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Homology

Preferred Names
RNA polymerase sigma-54 factor (sigma-L)
NP_391300.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 11274109, 12533460, 12634342, 16166551, 16585774; Product type r: regulator

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3512498..3513808 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391300.1 RNA polymerase sigma-54 factor (sigma-L) [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391300.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D4G1P6
    Conserved Domains (1) summary
    TIGR02395
    Location:9 → 433
    rpoN_sigma; RNA polymerase sigma-54 factor
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P24219.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials