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farP farnesyl diphosphate phosphatase [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 936353, updated on 6-Aug-2024
Gene symbol
farP
Gene description
farnesyl diphosphate phosphatase
Locus tag
BSU_10810
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU10810
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Sequence:
NC_000964.3 (1159922..1160746)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene asparagine synthetase (sporulation related) Neighboring gene conserved hypothetical protein (sporulation related) Neighboring gene putative Na(+)-driven efflux transporter Neighboring gene putative transcriptional regulator (AraC/XylS family)

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Structural and functional analysis of Bacillus subtilis YisP reveals a role of its product in biofilm production. Feng X, et al. Chem Biol, 2014 Nov 20. PMID 25308276, Free PMC Article
  2. Crystallization and preliminary X-ray diffraction analysis of YisP protein from Bacillus subtilis subsp. subtilis strain 168. Hu Y, et al. Acta Crystallogr Sect F Struct Biol Cryst Commun, 2013 Jan 1. PMID 23295493, Free PMC Article
  3. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  4. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  5. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. YisP acts as a phosphatase, catalyzing formation of farnesol from farnesyl diphosphate, and that it is the first phosphatase to adopt the fold seen in the head-to-head prenyl synthases.
    Title: Structural and functional analysis of Bacillus subtilis YisP reveals a role of its product in biofilm production.
  2. X-ray crystallographic analysis of the Yisp protein structure
    Title: Crystallization and preliminary X-ray diffraction analysis of YisP protein from Bacillus subtilis subsp. subtilis strain 168.
Submit: New GeneRIF Correction

Homology

Preferred Names
farnesyl diphosphate phosphatase
NP_388961.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 23295493, 25308276; Product type e: enzyme

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388961.1 farnesyl diphosphate phosphatase [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388961.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O06728, Q796Q9, Q798I6
    Conserved Domains (1) summary
    COG1562
    Location:6 → 274
    ERG9; Phytoene/squalene synthetase [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
3WE9_A.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials