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sbcD DNA repair exonuclease [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 936351, updated on 6-Oct-2023
Gene symbol
sbcD
Gene description
DNA repair exonuclease
Locus tag
BSU_10640
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU10640
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Try the new Transcripts and proteins table
Sequence:
NC_000964.3 (1143577..1144752)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene putative electron carrier protein (putative sporulation gene) Neighboring gene ATP-dependent deoxyribonuclease (subunit B) Neighboring gene ATP-dependent deoxyribonuclease (subunit A) Neighboring gene DNA ATP-dependent repair enzyme Neighboring gene HNH nuclease-like essential for DNA repair Neighboring gene spore germination protein

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
DNA repair exonuclease
NP_388945.3
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 7968921, 8493111, 16780573; Product type e: enzyme

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388945.3 DNA repair exonuclease [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388945.3

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1KT04
    Conserved Domains (2) summary
    TIGR00619
    Location:1 → 252
    sbcd; exonuclease SbcD
    pfam12320
    Location:276 → 365
    SbcD_C; Type 5 capsule protein repressor C-terminal domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P23479.5

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases