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hlpB HNH nuclease-like essential for DNA repair [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 936345, updated on 12-Feb-2021

Summary

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Gene symbol
hlpB
Gene description
HNH nuclease-like essential for DNA repair
Locus tag
BSU_10660
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU10660
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Genomic context

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Sequence:
NC_000964.3 (1148155..1148457)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene ATP-dependent deoxyribonuclease (subunit B) Neighboring gene ATP-dependent deoxyribonuclease (subunit A) Neighboring gene DNA repair exonuclease Neighboring gene DNA ATP-dependent repair enzyme Neighboring gene spore germination protein Neighboring gene spore germination protein Neighboring gene spore germination protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
HNH nuclease-like essential for DNA repair
NP_388947.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 16780573, 22984257; Product type ph: phenotype

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388947.1 HNH nuclease-like essential for DNA repair [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388947.1

    Status: PROVISIONAL

    Conserved Domains (1) summary
    cl00083
    Location:9 → 49
    HNHc; HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins. The alignment includes members of the large group of homing endonucleases, yeast intron 1 protein, MutS, as well as bacterial colicins, pyocins, and ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O06715.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases