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epsO pyruvyl transferase for matrix biofilm formation [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 936339, updated on 6-Oct-2023

Summary

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Gene symbol
epsO
Gene description
pyruvyl transferase for matrix biofilm formation
Locus tag
BSU_34220
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU34220
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Genomic context

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Sequence:
NC_000964.3 (3514115..3515083, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene RNA polymerase sigma-54 factor (sigma-L) Neighboring gene hypothetical protein Neighboring gene putative aminotransferase involved in biofilm matrix formation Neighboring gene putative O-acetyltransferase involved in biofilm matrix formation Neighboring gene putative phosphotransferase involved in extracellular matrix synthesis Neighboring gene putative extracellular matrix component exporter; putative cyclic di-GMP receptor Neighboring gene putative glycosyl transferase involved in biofilm matrix formation

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
pyruvyl transferase for matrix biofilm formation
NP_391302.1
  • Evidence 1c: Function from experimental evidences in the studied genus; PubMedId: 1097084, 115661000, 20720312, 23378512; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3514115..3515083 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391302.1 pyruvyl transferase for matrix biofilm formation [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391302.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1KRA5
    Conserved Domains (1) summary
    COG5039
    Location:1 → 322
    EpsI; Exopolysaccharide biosynthesis protein EpsI, predicted pyruvyl transferase [Carbohydrate transport and metabolism, Cell wall/membrane/envelope biogenesis]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P71065.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases