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hemAT heme-based dioxygen sensor [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 936320, updated on 17-Dec-2024
Gene symbol
hemAT
Gene description
heme-based dioxygen sensor
Locus tag
BSU_10380
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU10380
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Sequence:
NC_000964.3 (1112620..1113918, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene acetyl-CoA C-acetyltransferase Neighboring gene putative long-chain fatty-acid-CoA ligase (proofreading for biotin synthesis) Neighboring gene biotin transporter Neighboring gene putative oxidoreductase with Rieske [2Fe-2S] center Neighboring gene putative oxidoreductase

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Structural dynamics of proximal heme pocket in HemAT-Bs associated with oxygen dissociation. Yoshida Y, et al. Biochim Biophys Acta, 2012 Jul. PMID 22564695
  2. Protein conformation changes of HemAT-Bs upon ligand binding probed by ultraviolet resonance Raman spectroscopy. El-Mashtoly SF, et al. J Biol Chem, 2008 Mar 14. PMID 18162468
  3. Biophysical and kinetic characterization of HemAT, an aerotaxis receptor from Bacillus subtilis. Zhang W, et al. Biophys J, 2005 Apr. PMID 15653746, Free PMC Article
  4. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  5. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The heme proximal structural dynamics upon oxygen dissociation are coupled with signal transduction in HemAT-Bs.
    Title: Structural dynamics of proximal heme pocket in HemAT-Bs associated with oxygen dissociation.
  2. analysis of conformational changes of HemAT-Bs upon ligand binding
    Title: Protein conformation changes of HemAT-Bs upon ligand binding probed by ultraviolet resonance Raman spectroscopy.
  3. asymmetry and apparent negative cooperativity play an important role in the signal transduction pathway of HemAT
    Title: Biophysical and kinetic characterization of HemAT, an aerotaxis receptor from Bacillus subtilis.
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Homology

Preferred Names
heme-based dioxygen sensor
NP_388919.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 11481493, 12657801, 12962628, 15033535, 16819829, 17003124, 22528495, 22564695; Product type rc: receptor

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    1112620..1113918 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388919.1 heme-based dioxygen sensor [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388919.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8I2B8J5, A0AAX3RIQ3
    Conserved Domains (2) summary
    cd11386
    Location:221 → 420
    MCP_signal; Methyl-accepting chemotaxis protein (MCP), signaling domain
    cd01068
    Location:36 → 180
    globin_sensor; Globin sensor domain of globin-coupled-sensors (GCSs), protoglobins (Pgbs), and sensor single-domain globins (SSDgbs); S family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O07621.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases