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mncR non specific extracellular Ca2+-dependent endonuclease cleaving RNA and DNA [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 936241, updated on 4-Apr-2024

Summary

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Gene symbol
mncR
Gene description
non specific extracellular Ca2+-dependent endonuclease cleaving RNA and DNA
Locus tag
BSU_09190
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU09190
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Genomic context

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Sequence:
NC_000964.3 (991348..995001)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene putative germination lipoprotein Neighboring gene putative exported protein (sporulation germination island) Neighboring gene putative spore coat protein Neighboring gene sortase A Neighboring gene putative RNA pseudouridine synthase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
non specific extracellular Ca2+-dependent endonuclease cleaving RNA and DNA
NP_388800.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 15292138, 21800427, 22020651; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388800.1 non specific extracellular Ca2+-dependent endonuclease cleaving RNA and DNA [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388800.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1L0A3, D4G6V4
    Conserved Domains (5) summary
    smart00318
    Location:376 → 495
    SNc; Staphylococcal nuclease homologues
    COG4085
    Location:133 → 335
    YhcR; DNA/RNA endonuclease YhcR, contains UshA esterase domain [RNA processing and modification]
    cd07412
    Location:590 → 872
    MPP_YhcR_N; Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain
    pfam00746
    Location:1174 → 1215
    Gram_pos_anchor; LPXTG cell wall anchor motif
    pfam02872
    Location:901 → 1038
    5_nucleotid_C; 5'-nucleotidase, C-terminal domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P54602.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases