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ykvZ putative transcriptional regulator (LacI family) [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 936232, updated on 6-Jun-2024

Summary

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Gene symbol
ykvZ
Gene description
putative transcriptional regulator (LacI family)
Locus tag
BSU_13870
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU13870
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Genomic context

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Sequence:
NC_000964.3 (1455064..1456029)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene Fe(II) efflux transporter possibly involved in copper(II) uptake Neighboring gene Xaa-Pro Xaa-Pro-Xaa di-tri-peptidase used in osmoprotection Neighboring gene transcriptional antiterminator (BglG family) Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
putative transcriptional regulator (LacI family)
NP_389270.1
  • Evidence 3: Putative function from multiple computational evidences; Product type r: regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_389270.1 putative transcriptional regulator (LacI family) [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_389270.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D4FVW5
    Conserved Domains (2) summary
    smart00354
    Location:2 → 70
    HTH_LACI; helix_turn _helix lactose operon repressor
    cd06286
    Location:61 → 318
    PBP1_CcpB-like; ligand-binding domain of a novel transcription factor implicated in catabolite repression in Bacillus and Clostridium species
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O31690.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials