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smpB tmRNA-binding protein [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 936170, updated on 12-Feb-2021
Gene symbol
smpB
Gene description
tmRNA-binding protein
Locus tag
BSU_33600
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU33600
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Sequence:
NC_000964.3 (3451248..3451718, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene putative oxidoreductase Neighboring gene miscRNA Neighboring gene ribonuclease R Neighboring gene carboxylesterase

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. The SsrA-SmpB ribosome rescue system is important for growth of Bacillus subtilis at low and high temperatures. Shin JH, et al. J Bacteriol, 2007 May. PMID 17369301, Free PMC Article
  2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. smpB and ssrA were also required for growth at low temperature (16 degrees C) as well as high temperatures
    Title: The SsrA-SmpB ribosome rescue system is important for growth of Bacillus subtilis at low and high temperatures.
Submit: New GeneRIF Correction

Homology

Preferred Names
tmRNA-binding protein
NP_391240.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 10947848, 11395451, 11918677, 12682299, 26735940; Product type f: factor

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3451248..3451718 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391240.1 tmRNA-binding protein [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391240.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O32230
    Conserved Domains (1) summary
    pfam01668
    Location:9 → 151
    SmpB; SmpB protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O32230.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases