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rhgP rhamnogalacturonan permease [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 936076, updated on 17-Dec-2024
Gene symbol
rhgP
Gene description
rhamnogalacturonan permease
Locus tag
BSU_06980
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU06980
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Sequence:
NC_000964.3 (762942..763871)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene putative permease or sensor of a three component system for pectin and rhamnogalacturonan transport and degradation Neighboring gene two-component sensor histidine kinase [YesN] Neighboring gene two-component response regulator [YesM] Neighboring gene pectin degradation byproducts (rhamnose oligosaccharides)-binding lipoprotein Neighboring gene rhamnogalacturonan permease Neighboring gene rhamnogalacturonan hydrolase

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
rhamnogalacturonan permease
NP_388579.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 15849754, 16850406, 17449691; Product type t: transporter

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388579.1 rhamnogalacturonan permease [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388579.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAX3RKX0
    Conserved Domains (1) summary
    COG1175
    Location:11 → 296
    UgpA; ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O31519.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases