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sigP RNA polymerase ECF-type sigma factor [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 935973, updated on 6-Aug-2024

Summary

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Gene symbol
sigP
Gene description
RNA polymerase ECF-type sigma factor
Locus tag
BSU_14730
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU14730
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Genomic context

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Sequence:
NC_000964.3 (1544085..1544606)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene extracellular neutral metalloprotease Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene anti-SigP(YlaC) sigma factor Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptional analysis of the ylaABCD operon of Bacillus subtilis encoding a sigma factor of extracytoplasmic function family. Matsumoto T, et al. Genes Genet Syst, 2005 Dec. PMID 16501307
  2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Transcription of the ylaABCD sigma factor operon from the distal promoter was initiated by over-expression of YlaC on a multi-copy plasmid and depends on YlaC.
    Title: Transcriptional analysis of the ylaABCD operon of Bacillus subtilis encoding a sigma factor of extracytoplasmic function family.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
RNA polymerase ECF-type sigma factor
NP_389356.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 16501307, 16728958, 20817771; Product type r: regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_389356.1 RNA polymerase ECF-type sigma factor [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_389356.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAJ0JDD6
    Conserved Domains (1) summary
    TIGR02950
    Location:11 → 162
    SigM_subfam; RNA polymerase sigma factor, SigM family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O07627.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases