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LOC9315383 transcription factor bHLH155 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9315383, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9315383
Gene description
transcription factor bHLH155
Locus tag
ARALYDRAFT_668866
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302552.1 (14806043..14810996)

NW_003302552.1Genomic Context describing neighboring genes Neighboring gene CDT1-like protein a, chloroplastic Neighboring gene CDT1-like protein a, chloroplastic Neighboring gene protein ROOT PRIMORDIUM DEFECTIVE 1 Neighboring gene type 1 phosphatases regulator YPI2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302552 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor bHLH155
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302552.1 Reference v.1.0 Primary Assembly

    Range
    14806043..14810996
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021027734.1 → XP_020883393.1  transcription factor bHLH155 isoform X2

    Conserved Domains (2) summary
    smart00353
    Location:581 → 622
    HLH; helix loop helix domain
    pfam14215
    Location:32 → 175
    bHLH-MYC_N; bHLH-MYC and R2R3-MYB transcription factors N-terminal

  2. XM_002879270.2 → XP_002879316.1  transcription factor bHLH155 isoform X1

    See identical proteins and their annotated locations for XP_002879316.1

    UniProtKB/TrEMBL
    D7LD13
    Conserved Domains (2) summary
    smart00353
    Location:555 → 596
    HLH; helix loop helix domain
    pfam14215
    Location:6 → 149
    bHLH-MYC_N; bHLH-MYC and R2R3-MYB transcription factors N-terminal
Nucleotide Protein
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