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LOC9311906 probable pectinesterase/pectinesterase inhibitor 33 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9311906, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9311906
Gene description
probable pectinesterase/pectinesterase inhibitor 33
Locus tag
ARALYDRAFT_905963
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See LOC9311906 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302551.1 (13162282..13165766)

NW_003302551.1Genomic Context describing neighboring genes Neighboring gene pectinesterase inhibitor 11 Neighboring gene riboflavin biosynthesis protein PYRR, chloroplastic Neighboring gene uncharacterized LOC9311907 Neighboring gene uncharacterized LOC9313628 Neighboring gene NAC transcription factor 29

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302551 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectinesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pectinesterase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable pectinesterase/pectinesterase inhibitor 33
Names
pectinesterase family protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302551.1 Reference v.1.0 Primary Assembly

    Range
    13162282..13165766
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002875792.2 → XP_002875838.1  probable pectinesterase/pectinesterase inhibitor 33

    See identical proteins and their annotated locations for XP_002875838.1

    UniProtKB/TrEMBL
    D7LND0
    Conserved Domains (3) summary
    PLN02995
    Location:81 → 594
    PLN02995; Probable pectinesterase/pectinesterase inhibitor
    cd15798
    Location:86 → 243
    PMEI-like_3; Uncharacterized subfamily of plant invertase/pectin methylesterase inhibitor domains
    cl01911
    Location:280 → 579
    Pectinesterase; Pectinesterase
Nucleotide Protein
Heading Accession and Version

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