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LOC9272428 large ribosomal subunit protein bL19cy [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 9272428, updated on 12-Jul-2024
Gene symbol
LOC9272428
Gene description
large ribosomal subunit protein bL19cy
Locus tag
OSNPB_020652600
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (26803866..26806757, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (26317510..26320423, complement)

Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene vesicle-associated protein 2-1 Neighboring gene uncharacterized LOC136355122 Neighboring gene uncharacterized LOC136355283 Neighboring gene uncharacterized LOC107280123 Neighboring gene putative glycerol-3-phosphate transporter 4

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. The Nucleotide-Dependent Interactome of Rice Heterotrimeric G-Protein α -Subunit. Biswal AK, et al. Proteomics, 2019 May. PMID 30866160
  2. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
large ribosomal subunit protein bL19cy
Names
50S ribosomal protein L19-2, chloroplastic
Os02g0652600
P0491E01.20
putative plastid ribosomal protein L19

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

    Range
    26803866..26806757 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015768199.3 → XP_015623685.1  large ribosomal subunit protein bL19cy

    UniProtKB/TrEMBL
    C7IYA7, Q6H8H3, Q93Y51
    Conserved Domains (1) summary
    pfam01245
    Location:131 → 223
    Ribosomal_L19; Ribosomal protein L19
Nucleotide Protein
Heading Accession and Version

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