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LOC9271065 G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 9271065, updated on 12-Jul-2024
Gene symbol
LOC9271065
Gene description
G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130
Locus tag
OSNPB_010222900
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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See LOC9271065 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (6724914..6730180)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (6714753..6720162)

Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4326700 Neighboring gene uncharacterized LOC4326701 Neighboring gene G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 Neighboring gene GDSL esterase/lipase At5g45910-like Neighboring gene GDSL esterase/lipase At5g45910 Neighboring gene uncharacterized LOC4326705

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130
Names
Os01g0222900
P0443E05.17
putative S-domain receptor-like protein kinase

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

    Range
    6724914..6730180
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066303709.1 → XP_066159806.1  G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130

  2. XM_066303712.1 → XP_066159809.1  G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130

  3. XM_066303715.1 → XP_066159812.1  G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130

  4. XM_015795165.3 → XP_015650651.1  G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130

    Conserved Domains (5) summary
    smart00108
    Location:57 → 171
    B_lectin; Bulb-type mannose-specific lectin
    cd01098
    Location:317 → 396
    PAN_AP_plant; Plant PAN/APPLE-like domain; present in plant S-receptor protein kinases and secreted glycoproteins. PAN/APPLE domains fulfill diverse biological functions by mediating protein-protein or protein-carbohydrate interactions. S-receptor protein kinases and ...
    cd14066
    Location:467 → 731
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    pfam01453
    Location:95 → 196
    B_lectin; D-mannose binding lectin
    pfam07714
    Location:463 → 729
    Pkinase_Tyr; Protein tyrosine kinase
Nucleotide Protein
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