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LOC9270256 nascent polypeptide-associated complex subunit alpha-like protein 2 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 9270256, updated on 13-Oct-2018

Summary

Gene symbol
LOC9270256
Gene description
nascent polypeptide-associated complex subunit alpha-like protein 2
Locus tag
OSNPB_010698900
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
P0454A11.7
Expression
Low expression observed in reference dataset See more

Genomic context

See LOC9270256 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
102 current IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (28914364..28916050)

Chromosome 1 - NC_029256.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112936407 Neighboring gene uncharacterized LOC4325299 Neighboring gene mitogen-activated protein kinase kinase kinase 17 Neighboring gene mitogen-activated protein kinase kinase kinase 18

Genomic regions, transcripts, and products

Genomic Sequence:
NC_029256.1 Chromosome 1 Reference IRGSP-1.0 Primary Assembly

Expression

  • Project title: Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Markers

Homology

Gene Ontology Provided by Gramene

Component Evidence Code Pubs
plastid RCA
inferred from Reviewed Computational Analysis
more info
 

General protein information

Preferred Names
nascent polypeptide-associated complex subunit alpha-like protein 2
Names
Os01g0698900
alpha NAC-like protein

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IRGSP-1.0 Primary Assembly

Genomic

  1. NC_029256.1 Reference IRGSP-1.0 Primary Assembly

    Range
    28914364..28916050
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015787482.2XP_015642968.2  nascent polypeptide-associated complex subunit alpha-like protein 2

    Conserved Domains (2) summary
    pfam01849
    Location:207255
    NAC; NAC domain
    cl21463
    Location:294316
    UBA_like_SF; UBA domain-like superfamily
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