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LOC9267955 60S ribosomal protein L37-3 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 9267955, updated on 16-Jul-2024

Summary

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Gene symbol
LOC9267955
Gene description
60S ribosomal protein L37-3
Locus tag
OSNPB_020815000
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OJ1293_E04.26
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Genomic context

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See LOC9267955 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (35416703..35418448)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (34918050..34919891)

Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene glutathionyl-hydroquinone reductase YqjG Neighboring gene nicotinamide/nicotinic acid mononucleotide adenylyltransferase-like Neighboring gene uncharacterized LOC4331126 Neighboring gene 28 kDa ribonucleoprotein, chloroplastic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
60S ribosomal protein L37-3
Names
Os02g0815000
putative ribosomal protein L37

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001377484.1 → NP_001364413.1  60S ribosomal protein L37-3

    Status: VALIDATED

    Source sequence(s)
    CF322205
    UniProtKB/TrEMBL
    A2XAY8, B8BAF5, B9F470, Q6K8N7
    Conserved Domains (1) summary
    PTZ00073
    Location:1 → 91
    PTZ00073; 60S ribosomal protein L37; Provisional

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

    Range
    35416703..35418448
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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