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ZMYM6 zinc finger MYM-type containing 6 [ Homo sapiens (human) ]

Gene ID: 9204, updated on 25-Nov-2021

Summary

Official Symbol
ZMYM6provided by HGNC
Official Full Name
zinc finger MYM-type containing 6provided by HGNC
Primary source
HGNC:HGNC:13050
See related
Ensembl:ENSG00000163867 MIM:613567
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MYM; ZBED7; ZNF258; Buster2; ZNF198L4
Expression
Ubiquitous expression in spleen (RPKM 6.2), bone marrow (RPKM 5.8) and 25 other tissues See more
Orthologs
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Genomic context

See ZMYM6 in Genome Data Viewer
Location:
1p34.3
Exon count:
16
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (34986165..35031945, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (35451766..35497546, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 199, pseudogene Neighboring gene transmembrane protein 35B Neighboring gene ribosomal protein L12 pseudogene 45 Neighboring gene zinc finger MYM-type containing 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables DNA binding TAS
Traceable Author Statement
more info
PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in cytoskeleton organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of cell morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
zinc finger MYM-type protein 6
Names
transposon-derived Buster2 transposase-like protein
zinc finger protein 258
zinc finger, BED-type containing 7
zinc finger, MYM-type 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_007167.4NP_009098.3  zinc finger MYM-type protein 6

    See identical proteins and their annotated locations for NP_009098.3

    Status: VALIDATED

    Source sequence(s)
    AL833263, BC068534, BC107880
    Consensus CDS
    CCDS387.2
    UniProtKB/Swiss-Prot
    O95789
    Related
    ENSP00000349708.4, ENST00000357182.9
    Conserved Domains (2) summary
    smart00746
    Location:193228
    TRASH; metallochaperone-like domain
    pfam06467
    Location:131174
    zf-FCS; MYM-type Zinc finger with FCS sequence motif

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    34986165..35031945 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001024933.1: Suppressed sequence

    Description
    NM_001024933.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.
  2. NM_145310.2: Suppressed sequence

    Description
    NM_145310.2: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.
  3. NM_153248.2: Suppressed sequence

    Description
    NM_153248.2: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.
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