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ZNF830 zinc finger protein 830 [ Homo sapiens (human) ]

Gene ID: 91603, updated on 5-Aug-2022

Summary

Official Symbol
ZNF830provided by HGNC
Official Full Name
zinc finger protein 830provided by HGNC
Primary source
HGNC:HGNC:28291
See related
Ensembl:ENSG00000198783 AllianceGenome:HGNC:28291
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
OMCG1; CCDC16
Summary
Predicted to enable nucleic acid binding activity and zinc ion binding activity. Predicted to be involved in several processes, including DNA-dependent DNA replication; mitotic DNA integrity checkpoint signaling; and preantral ovarian follicle growth. Predicted to act upstream of or within several processes, including blastocyst growth; chromosome organization; and intestinal epithelial structure maintenance. Predicted to be located in nucleoplasm. Predicted to be part of spliceosomal complex. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See ZNF830 in Genome Data Viewer
Location:
17q12
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (34961540..34963777)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (35908554..35910791)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (33288559..33290796)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124903987 Neighboring gene uncharacterized LOC105371742 Neighboring gene chaperonin containing TCP1 subunit 6B Neighboring gene RAD51L3-RFFL readthrough Neighboring gene DNA ligase 3 Neighboring gene oligosaccharyltransferase complex subunit pseudogene 7 Neighboring gene ring finger and FYVE like domain containing E3 ubiquitin protein ligase Neighboring gene small nucleolar RNA U13

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC20398

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in RNA splicing IEA
Inferred from Electronic Annotation
more info
 
involved_in blastocyst growth IEA
Inferred from Electronic Annotation
more info
 
involved_in cell division IEA
Inferred from Electronic Annotation
more info
 
involved_in chromosome organization IEA
Inferred from Electronic Annotation
more info
 
involved_in intestinal epithelial structure maintenance IEA
Inferred from Electronic Annotation
more info
 
involved_in mRNA processing IEA
Inferred from Electronic Annotation
more info
 
involved_in mitotic DNA damage checkpoint signaling IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in mitotic DNA replication checkpoint signaling IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in mitotic DNA replication checkpoint signaling ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in negative regulation of apoptotic process ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in nuclear DNA replication IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in ovarian follicle development ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in preantral ovarian follicle growth ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in replication fork protection IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in replication fork protection ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in chromosome IEA
Inferred from Electronic Annotation
more info
 
located_in nuclear speck IEA
Inferred from Electronic Annotation
more info
 
located_in nucleoplasm TAS
Traceable Author Statement
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
zinc finger protein 830
Names
coiled-coil domain containing 16
coiled-coil domain-containing protein 16
hypothetical protein MGC20398
orphan maintenance of genome 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_052857.4NP_443089.3  zinc finger protein 830

    See identical proteins and their annotated locations for NP_443089.3

    Status: VALIDATED

    Source sequence(s)
    AC022903, AI866097, BC009044, BG766126, DB030670
    Consensus CDS
    CCDS32618.1
    UniProtKB/Swiss-Prot
    Q96NB3, Q9BU38
    Related
    ENSP00000354518.3, ENST00000361952.5
    Conserved Domains (1) summary
    smart00451
    Location:4982
    ZnF_U1; U1-like zinc finger

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    34961540..34963777
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    35908554..35910791
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)