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escC T3SS structure protein EscC [ Escherichia coli O157:H7 str. Sakai ]

Gene ID: 915461, updated on 6-Oct-2023

Summary

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Gene symbol
escC
Gene description
T3SS structure protein EscC
Locus tag
ECs_4575
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli O157:H7 str. Sakai (strain: Sakai, substrain: RIMD 0509952, serovar: O157:H7)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
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Genomic context

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Sequence:
NC_002695.2 (4611501..4613039)

NC_002695.2Genomic Context describing neighboring genes Neighboring gene T3SS component Neighboring gene T3SS structure protein EscJ Neighboring gene T3SS secretion switching protein SepD Neighboring gene T3SS chaperone CesD Neighboring gene positive regulator GrlA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002695.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The role of EscD in supporting EscC polymerization in the type III secretion system of enteropathogenic Escherichia coli. Tseytin I, et al. Biochim Biophys Acta Biomembr, 2018 Feb. PMID 28988128
  2. Comparative analysis of the whole set of rRNA operons between an enterohemorrhagic Escherichia coli O157:H7 Sakai strain and an Escherichia coli K-12 strain MG1655. Ohnishi M, et al. Syst Appl Microbiol, 2000 Oct. PMID 11108008
  3. Complete nucleotide sequence of the prophage VT2-Sakai carrying the verotoxin 2 genes of the enterohemorrhagic Escherichia coli O157:H7 derived from the Sakai outbreak. Makino K, et al. Genes Genet Syst, 1999 Oct. PMID 10734605
  4. Complete nucleotide sequence of the prophage VT1-Sakai carrying the Shiga toxin 1 genes of the enterohemorrhagic Escherichia coli O157:H7 strain derived from the Sakai outbreak. Yokoyama K, et al. Gene, 2000 Nov 27. PMID 11111050
  5. Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12. Hayashi T, et al. DNA Res, 2001 Feb 28. PMID 11258796

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Data show that EscD is crucial for the oligomerization of EscC.
    Title: The role of EscD in supporting EscC polymerization in the type III secretion system of enteropathogenic Escherichia coli.
Submit: New GeneRIF Correction

General protein information

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Preferred Names
T3SS structure protein EscC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002695.2 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_312602.1 T3SS structure protein EscC [Escherichia coli O157:H7 str. Sakai]

    See identical proteins and their annotated locations for NP_312602.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    O52135
    Conserved Domains (1) summary
    PRK15346
    Location:1 → 511
    PRK15346; EscC/YscC/HrcC family type III secretion system outer membrane ring protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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