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CDKN2AIPNL CDKN2A interacting protein N-terminal like [ Homo sapiens (human) ]

Gene ID: 91368, updated on 5-Aug-2022

Summary

Official Symbol
CDKN2AIPNLprovided by HGNC
Official Full Name
CDKN2A interacting protein N-terminal likeprovided by HGNC
Primary source
HGNC:HGNC:30545
See related
Ensembl:ENSG00000237190 AllianceGenome:HGNC:30545
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C2AIL
Summary
Predicted to be active in nucleolus and nucleoplasm. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in thyroid (RPKM 3.8), testis (RPKM 3.7) and 25 other tissues See more
Orthologs
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Genomic context

See CDKN2AIPNL in Genome Data Viewer
Location:
5q31.1
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (134402065..134411881, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (134925882..134935700, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (133737756..133747572, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene ribosomal protein S13 pseudogene 6 Neighboring gene cyclin dependent kinase like 3 Neighboring gene ubiquitin conjugating enzyme E2 B Neighboring gene ribosomal protein S10 pseudogene 11 Neighboring gene long intergenic non-protein coding RNA 2999

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC13017

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
is_active_in nucleolus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
is_active_in nucleoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
CDKN2AIP N-terminal-like protein
Names
CDKN2A-interacting protein N-terminal-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_080656.3NP_542387.1  CDKN2AIP N-terminal-like protein

    See identical proteins and their annotated locations for NP_542387.1

    Status: VALIDATED

    Source sequence(s)
    BC008293, BM997508
    Consensus CDS
    CCDS4175.1
    UniProtKB/Swiss-Prot
    Q8WVE3, Q96HQ2
    Related
    ENSP00000394183.2, ENST00000458198.3
    Conserved Domains (1) summary
    pfam11952
    Location:25113
    XTBD; XRN-Two Binding Domain, XTBD

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    134402065..134411881 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    134925882..134935700 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)