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GUSBP11 GUSB pseudogene 11 [ Homo sapiens (human) ]

Gene ID: 91316, updated on 13-Mar-2020

Summary

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Official Symbol
GUSBP11provided by HGNC
Official Full Name
GUSB pseudogene 11provided by HGNC
Primary source
HGNC:HGNC:42325
See related
Ensembl:ENSG00000228315
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
This transcribed pseudogene is similar to two functional genes. The 5' portion of the pseudogene is related to glucuronidase, beta, and the 3' portion is related to immunoglobulin lambda-like polypeptide 1. [provided by RefSeq, Jul 2011]
Expression
Ubiquitous expression in bone marrow (RPKM 14.2), spleen (RPKM 9.8) and 25 other tissues See more

Genomic context

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See GUSBP11 in Genome Data Viewer
Location:
22q11.23
Exon count:
12
Annotation release Status Assembly Chr Location
109.20200228 current GRCh38.p13 (GCF_000001405.39) 22 NC_000022.11 (23638487..23717423, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (23980674..24059610, complement)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene immunoglobulin lambda like polypeptide 1 Neighboring gene aspartate rich 1 Neighboring gene argininosuccinate lyase pseudogene 1 Neighboring gene ral guanine nucleotide dissociation stimulator like 4 Neighboring gene zinc finger protein 70 Neighboring gene V-set pre-B cell surrogate light chain 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Composite exon structure of an unusual Ig lambda-like gene located at human 22q11 position. Schiff C, et al. Mamm Genome, 1996 Aug. PMID 8678981
  2. Isolation of early immunoglobulin lambda-like gene transcripts in human fetal liver. Schiff C, et al. Eur J Immunol, 1989 Oct. PMID 2511029
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. Ota T, et al. Nat Genet, 2004 Jan. PMID 14702039
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

Genotypes

General gene information

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Markers

Other Names

  • glucuronidase, beta pseudogene 11
  • glucuronidase, beta/immunoglobulin lambda-like polypeptide 1 pseudogene

Clone Names

  • FLJ52668

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_024448.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK056875, AK300413, BC050388, BX538181, DC322250, X52204
    Related
    ENST00000445682.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p13 Primary Assembly

    Range
    23638487..23717423 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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