U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

C12orf29 chromosome 12 open reading frame 29 [ Homo sapiens (human) ]

Gene ID: 91298, updated on 6-Sep-2022

Summary

Official Symbol
C12orf29provided by HGNC
Official Full Name
chromosome 12 open reading frame 29provided by HGNC
Primary source
HGNC:HGNC:25322
See related
Ensembl:ENSG00000133641 AllianceGenome:HGNC:25322
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to act upstream of or within hematopoietic progenitor cell differentiation. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in esophagus (RPKM 11.3), skin (RPKM 9.4) and 25 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See C12orf29 in Genome Data Viewer
Location:
12q21.32
Exon count:
7
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (88035536..88050160)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (88017414..88032038)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (88429313..88443937)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene chromosome 12 open reading frame 50 Neighboring gene uncharacterized LOC107984542 Neighboring gene uncharacterized LOC124902977 Neighboring gene transmembrane protein 38A pseudogene Neighboring gene RNA, 5S ribosomal pseudogene 364 Neighboring gene centrosomal protein 290

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ38158, MGC102978, DKFZp313K0436, DKFZp434N2030, DKFZp686L04169

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in hematopoietic progenitor cell differentiation IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
uncharacterized protein C12orf29

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001009894.3NP_001009894.2  uncharacterized protein C12orf29

    See identical proteins and their annotated locations for NP_001009894.2

    Status: VALIDATED

    Source sequence(s)
    AK095477, AL049382, BC058014, CR936776
    Consensus CDS
    CCDS31866.1
    UniProtKB/Swiss-Prot
    Q8N999, Q9NT75
    Related
    ENSP00000349358.3, ENST00000356891.4

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    88035536..88050160
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    88017414..88032038
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)