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CREB3L1 cAMP responsive element binding protein 3 like 1 [ Homo sapiens (human) ]

Gene ID: 90993, updated on 1-Jun-2020

Summary

Official Symbol
CREB3L1provided by HGNC
Official Full Name
cAMP responsive element binding protein 3 like 1provided by HGNC
Primary source
HGNC:HGNC:18856
See related
Ensembl:ENSG00000157613 MIM:616215
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
OI16; OASIS
Summary
The protein encoded by this gene is normally found in the membrane of the endoplasmic reticulum (ER). However, upon stress to the ER, the encoded protein is cleaved and the released cytoplasmic transcription factor domain translocates to the nucleus. There it activates the transcription of target genes by binding to box-B elements. [provided by RefSeq, Jun 2013]
Expression
Broad expression in stomach (RPKM 29.2), colon (RPKM 23.7) and 16 other tissues See more
Orthologs

Genomic context

See CREB3L1 in Genome Data Viewer
Location:
11p11.2
Exon count:
13
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 11 NC_000011.10 (46277661..46321409)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (46299189..46342972)

Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene CRISPRi-validated cis-regulatory element chr11.2129 Neighboring gene long intergenic non-protein coding RNA 2489 Neighboring gene diacylglycerol kinase zeta Neighboring gene microRNA 4688 Neighboring gene cholinergic receptor muscarinic 4 Neighboring gene midkine

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
DNA-binding transcription activator activity, RNA polymerase II-specific ISS
Inferred from Sequence or Structural Similarity
more info
 
DNA-binding transcription factor activity, RNA polymerase II-specific ISA
Inferred from Sequence Alignment
more info
 
DNA-binding transcription factor activity, RNA polymerase II-specific ISM
Inferred from Sequence Model
more info
PubMed 
DNA-binding transcription repressor activity, RNA polymerase II-specific IDA
Inferred from Direct Assay
more info
PubMed 
SMAD binding IPI
Inferred from Physical Interaction
more info
PubMed 
cAMP response element binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cAMP response element binding ISS
Inferred from Sequence or Structural Similarity
more info
 
chromatin binding ISS
Inferred from Sequence or Structural Similarity
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
transcription regulatory region sequence-specific DNA binding ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
endoplasmic reticulum IDA
Inferred from Direct Assay
more info
PubMed 
endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IDA
Inferred from Direct Assay
more info
PubMed 
nuclear chromatin IDA
Inferred from Direct Assay
more info
PubMed 
nuclear chromatin ISA
Inferred from Sequence Alignment
more info
 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
cyclic AMP-responsive element-binding protein 3-like protein 1
Names
BBF-2 homolog
cAMP-responsive element-binding protein 3-like protein 1
old astrocyte specifically-induced substance

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_033264.1 RefSeqGene

    Range
    5025..48771
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_052854.4NP_443086.1  cyclic AMP-responsive element-binding protein 3-like protein 1

    See identical proteins and their annotated locations for NP_443086.1

    Status: REVIEWED

    Source sequence(s)
    AC116021, AK314072, BC015781, CF131922
    Consensus CDS
    CCDS53620.1
    UniProtKB/Swiss-Prot
    Q96BA8
    UniProtKB/TrEMBL
    B2RA75
    Related
    ENSP00000481956.1, ENST00000621158.5
    Conserved Domains (1) summary
    cd14689
    Location:291344
    bZIP_CREB3; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 3 (CREB3) and similar proteins: a DNA-binding and dimerization domain

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000011.10 Reference GRCh38.p13 Primary Assembly

    Range
    46277661..46321409
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006718380.3XP_006718443.1  cyclic AMP-responsive element-binding protein 3-like protein 1 isoform X1

    Conserved Domains (1) summary
    cd14689
    Location:291343
    bZIP_CREB3; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 3 (CREB3) and similar proteins: a DNA-binding and dimerization domain
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