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JPT2 Jupiter microtubule associated homolog 2 [ Homo sapiens (human) ]

Gene ID: 90861, updated on 5-Aug-2022

Summary

Official Symbol
JPT2provided by HGNC
Official Full Name
Jupiter microtubule associated homolog 2provided by HGNC
Primary source
HGNC:HGNC:14137
See related
Ensembl:ENSG00000206053 MIM:619241; AllianceGenome:HGNC:14137
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
L11; HN1L; C16orf34
Summary
Located in cytosol and plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in prostate (RPKM 16.7), placenta (RPKM 16.5) and 25 other tissues See more
Orthologs
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Genomic context

See JPT2 in Genome Data Viewer
Location:
16p13.3
Exon count:
5
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (1678279..1702086)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (1694127..1717934)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (1728280..1752087)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene intraflagellar transport 140 Neighboring gene uncharacterized LOC105371046 Neighboring gene cramped chromatin regulator homolog 1 Neighboring gene Sharpr-MPRA regulatory region 11614 Neighboring gene MAPK8IP3 antisense RNA 1 Neighboring gene mitogen-activated protein kinase 8 interacting protein 3 Neighboring gene microRNA 3177

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Potential readthrough

Included gene: CRAMP1

Homology

Clone Names

  • FLJ13092, KIAA1426

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 

General protein information

Preferred Names
jupiter microtubule associated homolog 2
Names
CRAMP_1 like
HN1 like
HN1-like protein
hematological and neurological expressed 1 like
hematological and neurological expressed 1-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_144570.3NP_653171.1  jupiter microtubule associated homolog 2

    See identical proteins and their annotated locations for NP_653171.1

    Status: VALIDATED

    Source sequence(s)
    AK023154, AL031710, BC060853, BM474060, BM837125
    Consensus CDS
    CCDS10441.1
    UniProtKB/Swiss-Prot
    Q6EIC7, Q9H910
    Related
    ENSP00000248098.3, ENST00000248098.8
    Conserved Domains (1) summary
    pfam17054
    Location:1048
    JUPITER; Microtubule-Associated protein Jupiter

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    1678279..1702086
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    1694127..1717934
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)