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CCDC32 coiled-coil domain containing 32 [ Homo sapiens (human) ]

Gene ID: 90416, updated on 23-Nov-2021

Summary

Official Symbol
CCDC32provided by HGNC
Official Full Name
coiled-coil domain containing 32provided by HGNC
Primary source
HGNC:HGNC:28295
See related
Ensembl:ENSG00000128891 MIM:618941
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CFNDS; C15orf57
Expression
Ubiquitous expression in lymph node (RPKM 6.7), ovary (RPKM 6.3) and 25 other tissues See more
Orthologs
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Genomic context

See CCDC32 in Genome Data Viewer
Location:
15q15.1
Exon count:
8
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 15 NC_000015.10 (40520993..40565042, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (40813192..40857241, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene ribosomal protein L9 pseudogene 27 Neighboring gene Sharpr-MPRA regulatory region 12089 Neighboring gene RNA, U6 small nuclear 516, pseudogene Neighboring gene mitochondrial ribosomal protein L42 pseudogene 5 Neighboring gene Sharpr-MPRA regulatory region 4500 Neighboring gene RNA pseudouridine synthase domain containing 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

HIV-1 interactions

Protein interactions

Protein Gene Interaction Pubs
integrase gag-pol Using acetylated HIV-1 IN as bait in yeast two-hybrid screening identifies CCDC32 as IN-binding partner PubMed

Go to the HIV-1, Human Interaction Database

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ25915, MGC20481

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in cilium organization ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in head development IMP
Inferred from Mutant Phenotype
more info
PubMed 

General protein information

Preferred Names
coiled-coil domain-containing protein 32
Names
uncharacterized protein C15orf57

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001080791.4NP_001074260.2  coiled-coil domain-containing protein 32 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC091045
    Consensus CDS
    CCDS42022.1
    Related
    ENSP00000452773.1, ENST00000558750.5
    Conserved Domains (1) summary
    pfam14989
    Location:18166
    CCDC32; Coiled-coil domain containing 32
  2. NM_001080792.4NP_001074261.1  coiled-coil domain-containing protein 32 isoform 2

    See identical proteins and their annotated locations for NP_001074261.1

    Status: VALIDATED

    Source sequence(s)
    AC091045
    Consensus CDS
    CCDS10060.1
    UniProtKB/Swiss-Prot
    Q9BV29
    UniProtKB/TrEMBL
    A0A024R9J9
    Related
    ENSP00000397515.2, ENST00000416810.7
    Conserved Domains (1) summary
    pfam14989
    Location:18166
    CCDC32; Coiled-coil domain containing 32
  3. NM_001289132.2NP_001276061.1  coiled-coil domain-containing protein 32 isoform 3

    See identical proteins and their annotated locations for NP_001276061.1

    Status: VALIDATED

    Source sequence(s)
    AC091045
    Consensus CDS
    CCDS73706.1
    UniProtKB/Swiss-Prot
    Q9BV29
    Related
    ENSP00000454049.1, ENST00000561011.5
    Conserved Domains (1) summary
    pfam14989
    Location:18133
    CCDC32; Coiled-coil domain containing 32
  4. NM_001382434.1NP_001369363.1  coiled-coil domain-containing protein 32 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC091045
    Conserved Domains (1) summary
    pfam14989
    Location:18166
    CCDC32; Coiled-coil domain containing 32
  5. NM_001382435.1NP_001369364.1  coiled-coil domain-containing protein 32 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC091045
    Conserved Domains (1) summary
    pfam14989
    Location:18166
    CCDC32; Coiled-coil domain containing 32
  6. NM_001382436.1NP_001369365.1  coiled-coil domain-containing protein 32 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC091045
    Related
    ENSP00000453899.1, ENST00000559103.1
    Conserved Domains (1) summary
    pfam14989
    Location:18166
    CCDC32; Coiled-coil domain containing 32
  7. NM_001382437.1NP_001369366.1  coiled-coil domain-containing protein 32 isoform 4

    Status: VALIDATED

    Source sequence(s)
    AC091045
    Related
    ENSP00000453544.1, ENST00000559911.5
    Conserved Domains (1) summary
    pfam14989
    Location:18133
    CCDC32; Coiled-coil domain containing 32
  8. NM_001382438.1NP_001369367.1  coiled-coil domain-containing protein 32 isoform 5

    Status: VALIDATED

    Source sequence(s)
    AC091045
    Related
    ENSP00000453221.1, ENST00000558113.5
    Conserved Domains (1) summary
    pfam14989
    Location:18133
    CCDC32; Coiled-coil domain containing 32
  9. NM_001382439.1NP_001369368.1  coiled-coil domain-containing protein 32 isoform 6

    Status: VALIDATED

    Source sequence(s)
    AC091045
    Conserved Domains (1) summary
    pfam14989
    Location:18133
    CCDC32; Coiled-coil domain containing 32
  10. NM_001382440.1NP_001369369.1  coiled-coil domain-containing protein 32 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC091045
    Conserved Domains (1) summary
    pfam14989
    Location:18133
    CCDC32; Coiled-coil domain containing 32
  11. NM_001382441.1NP_001369370.1  coiled-coil domain-containing protein 32 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AC091045
    Conserved Domains (1) summary
    pfam14989
    Location:18133
    CCDC32; Coiled-coil domain containing 32
  12. NM_001382442.1NP_001369371.1  coiled-coil domain-containing protein 32 isoform 7

    Status: VALIDATED

    Source sequence(s)
    AC091045
    Conserved Domains (1) summary
    pfam14989
    Location:18172
    CCDC32; Coiled-coil domain containing 32
  13. NM_052849.5NP_443081.1  coiled-coil domain-containing protein 32 isoform 2

    See identical proteins and their annotated locations for NP_443081.1

    Status: VALIDATED

    Source sequence(s)
    AC091045
    Consensus CDS
    CCDS10060.1
    UniProtKB/Swiss-Prot
    Q9BV29
    UniProtKB/TrEMBL
    A0A024R9J9
    Related
    ENSP00000350695.3, ENST00000358005.7
    Conserved Domains (1) summary
    pfam14989
    Location:18166
    CCDC32; Coiled-coil domain containing 32

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p13 Primary Assembly

    Range
    40520993..40565042 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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