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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001171156.2 → NP_001164627.1 sialic acid-binding Ig-like lectin 10 isoform 2 precursor
See identical proteins and their annotated locations for NP_001164627.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an in-frame segment in the CDS, as compared to variant 1. The resulting isoform (2) lacks an internal segment, as compared to isoform 1.
- Source sequence(s)
-
AC008750
- Consensus CDS
-
CCDS54303.1
- UniProtKB/TrEMBL
-
B7ZL06
- Related
- ENSP00000389132.2, ENST00000439889.7
- Conserved Domains (4) summary
-
- cd00096
Location:320 → 381
- Ig; Immunoglobulin domain
- smart00408
Location:211 → 272
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:309 → 384
- IG_like; Immunoglobulin like
- cl11960
Location:23 → 140
- Ig; Immunoglobulin domain
-
NM_001171157.2 → NP_001164628.1 sialic acid-binding Ig-like lectin 10 isoform 3 precursor
See identical proteins and their annotated locations for NP_001164628.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an in-frame exon in the CDS, as compared to variant 1. The resulting isoform (3) lacks an internal segment, as compared to isoform 1.
- Source sequence(s)
-
AC008750
- Consensus CDS
-
CCDS54305.1
- UniProtKB/TrEMBL
-
B7ZL04
- Related
- ENSP00000342389.5, ENST00000353836.10
- Conserved Domains (3) summary
-
- cd00096
Location:146 → 150
- Ig; Ig strand A [structural motif]
- cd05712
Location:21 → 140
- IgV_CD33; Immunoglobulin Variable (IgV) domain at the N-terminus of CD33 and related Siglecs (sialic acid-binding Ig-like lectins)
- cl11960
Location:146 → 233
- Ig; Immunoglobulin domain
-
NM_001171158.2 → NP_001164629.1 sialic acid-binding Ig-like lectin 10 isoform 4 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks an in-frame segment and an in-frame exon in the CDS, as compared to variant 1. The resulting isoform (4) lacks two internal segments, as compared to isoform 1.
- Source sequence(s)
-
AC008750
- Consensus CDS
-
CCDS54304.1
- UniProtKB/TrEMBL
-
B7ZL04
- Related
- ENSP00000414324.2, ENST00000436984.7
- Conserved Domains (4) summary
-
- cd00096
Location:330 → 391
- Ig; Immunoglobulin domain
- smart00408
Location:221 → 282
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:319 → 394
- IG_like; Immunoglobulin like
- cl11960
Location:23 → 140
- Ig; Immunoglobulin domain
-
NM_001171159.2 → NP_001164630.1 sialic acid-binding Ig-like lectin 10 isoform 5 precursor
See identical proteins and their annotated locations for NP_001164630.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks an in-frame segment and an in-frame exon in the CDS, as compared to variant 1. The resulting isoform (5) lacks two internal segments, as compared to isoform 1.
- Source sequence(s)
-
AC008750
- Consensus CDS
-
CCDS54302.1
- UniProtKB/TrEMBL
-
B7ZL04
- Related
- ENSP00000408387.2, ENST00000441969.8
- Conserved Domains (4) summary
-
- cd00096
Location:320 → 381
- Ig; Immunoglobulin domain
- smart00408
Location:211 → 272
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:309 → 384
- IG_like; Immunoglobulin like
- cl11960
Location:23 → 140
- Ig; Immunoglobulin domain
-
NM_001171161.2 → NP_001164632.1 sialic acid-binding Ig-like lectin 10 isoform 7 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) lacks an in-frame segment and two in-frame exons in the CDS, as compared to variant 1. The resulting isoform (7) lacks three internal segments, as compared to isoform 1.
- Source sequence(s)
-
AC008750
- Consensus CDS
-
CCDS54301.1
- UniProtKB/TrEMBL
-
A0ACI8VB05
- Related
- ENSP00000395475.2, ENST00000442846.7
- Conserved Domains (3) summary
-
- cd00096
Location:230 → 291
- Ig; Immunoglobulin domain
- smart00410
Location:219 → 294
- IG_like; Immunoglobulin like
- cl11960
Location:23 → 140
- Ig; Immunoglobulin domain
-
NM_001322105.2 → NP_001309034.1 sialic acid-binding Ig-like lectin 10 isoform 8 precursor
Status: REVIEWED
- Source sequence(s)
-
AC008750
- Consensus CDS
-
CCDS82384.1
- UniProtKB/TrEMBL
- A0ACI8VB05, E9PL79
- Related
- ENSP00000431444.1, ENST00000525998.6
- Conserved Domains (3) summary
-
- cd00096
Location:288 → 349
- Ig; Immunoglobulin domain
- smart00410
Location:277 → 352
- IG_like; Immunoglobulin like
- cl11960
Location:23 → 140
- Ig; Immunoglobulin domain
-
NM_033130.5 → NP_149121.2 sialic acid-binding Ig-like lectin 10 isoform 1 precursor
See identical proteins and their annotated locations for NP_149121.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AC008750
- Consensus CDS
-
CCDS12832.1
- UniProtKB/Swiss-Prot
- A8K1I5, A8K3C7, C9JJ33, C9JM10, F8W917, Q3MIR5, Q6UXI8, Q96G54, Q96LC7, Q96LC8
- UniProtKB/TrEMBL
-
B7ZL06
- Related
- ENSP00000345243.4, ENST00000339313.10
- Conserved Domains (4) summary
-
- cd00096
Location:378 → 439
- Ig; Immunoglobulin domain
- smart00408
Location:269 → 330
- IGc2; Immunoglobulin C-2 Type
- smart00410
Location:367 → 442
- IG_like; Immunoglobulin like
- cl11960
Location:23 → 140
- Ig; Immunoglobulin domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000019.10 Reference GRCh38.p14 Primary Assembly
- Range
-
51410020..51417642 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047439605.1 → XP_047295561.1 sialic acid-binding Ig-like lectin 10 isoform X6
- UniProtKB/TrEMBL
-
B7ZL04
-
XM_047439602.1 → XP_047295558.1 sialic acid-binding Ig-like lectin 10 isoform X3
- UniProtKB/TrEMBL
-
B7ZL06
-
XM_047439601.1 → XP_047295557.1 sialic acid-binding Ig-like lectin 10 isoform X2
- UniProtKB/TrEMBL
-
B7ZL06
-
XM_047439603.1 → XP_047295559.1 sialic acid-binding Ig-like lectin 10 isoform X4
- UniProtKB/TrEMBL
-
B7ZL04
-
XM_047439600.1 → XP_047295556.1 sialic acid-binding Ig-like lectin 10 isoform X1
- UniProtKB/TrEMBL
-
B7ZL06
- Related
-
ENST00000357375.4
-
XM_005259367.5 → XP_005259424.1 sialic acid-binding Ig-like lectin 10 isoform X8
- UniProtKB/TrEMBL
-
B7ZL06
- Conserved Domains (3) summary
-
- cd00096
Location:230 → 291
- Ig; Immunoglobulin domain
- smart00410
Location:219 → 294
- IG_like; Immunoglobulin like
- cl11960
Location:23 → 140
- Ig; Immunoglobulin domain
-
XM_047439604.1 → XP_047295560.1 sialic acid-binding Ig-like lectin 10 isoform X5
- UniProtKB/TrEMBL
- A0ACI8VAW7, B7ZL06
- Related
- ENSP00000631867.1, ENST00000961808.2
-
XM_005259366.6 → XP_005259423.1 sialic acid-binding Ig-like lectin 10 isoform X7
- UniProtKB/TrEMBL
- A0ACI8VAX9, B7ZL06
- Related
- ENSP00000631866.1, ENST00000961807.2
- Conserved Domains (3) summary
-
- cd00096
Location:288 → 349
- Ig; Immunoglobulin domain
- smart00410
Location:277 → 352
- IG_like; Immunoglobulin like
- cl11960
Location:23 → 140
- Ig; Immunoglobulin domain
Alternate T2T-CHM13v2.0
Genomic
-
NC_060943.1 Alternate T2T-CHM13v2.0
- Range
-
54498651..54506273 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054322496.1 → XP_054178471.1 sialic acid-binding Ig-like lectin 10 isoform X8
- UniProtKB/TrEMBL
-
B7ZL06
-
XM_054322494.1 → XP_054178469.1 sialic acid-binding Ig-like lectin 10 isoform X5
- UniProtKB/TrEMBL
- A0ACI8VAW7, B7ZL06
-
XM_054322495.1 → XP_054178470.1 sialic acid-binding Ig-like lectin 10 isoform X7
- UniProtKB/TrEMBL
- A0ACI8VAX9, B7ZL06
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001171160.1: Suppressed sequence
- Description
- NM_001171160.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.