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ddlB D-alanine--D-alanine ligase B [ Pantoea ananatis LMG 20103 ]

Gene ID: 8894558, discontinued on 4-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:
Gene symbol
ddlB
Gene description
D-alanine--D-alanine ligase B
Locus tag
PANA_0721
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pantoea ananatis LMG 20103 (strain: LMG 20103, nat-host: Eucalyptus, culture-collection: LMG:20103)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • D-Alanine metabolism, organism-specific biosystem (from KEGG)
    D-Alanine metabolism, organism-specific biosystem
    D-Alanine metabolism
  • D-Alanine metabolism, conserved biosystem (from KEGG)
    D-Alanine metabolism, conserved biosystem
    D-Alanine metabolism
  • Peptidoglycan biosynthesis, organism-specific biosystem (from KEGG)
    Peptidoglycan biosynthesis, organism-specific biosystemPeptidoglycan is a macromolecule made of long aminosugar strands cross-linked by short peptides. It forms the cell wall in bacteria surrounding the cytoplasmic membrane. The glycan strands are typica...
  • Peptidoglycan biosynthesis, conserved biosystem (from KEGG)
    Peptidoglycan biosynthesis, conserved biosystemPeptidoglycan is a macromolecule made of long aminosugar strands cross-linked by short peptides. It forms the cell wall in bacteria surrounding the cytoplasmic membrane. The glycan strands are typica...
  • Vancomycin resistance, organism-specific biosystem (from KEGG)
    Vancomycin resistance, organism-specific biosystemVancomycin (VCM) is a glycopeptide antibiotic agent that inhibits the synthesis of peptidolgycan in the production of bacterial cell walls. It is active in most Gram-positive bacteria and acts by bin...
  • Vancomycin resistance, conserved biosystem (from KEGG)
    Vancomycin resistance, conserved biosystemVancomycin (VCM) is a glycopeptide antibiotic agent that inhibits the synthesis of peptidolgycan in the production of bacterial cell walls. It is active in most Gram-positive bacteria and acts by bin...
Preferred Names
D-alanine--D-alanine ligase B
Names
DdlB
YP_003519016.1
  • Similar to Pantoea sp. At-9b, D-alanine/D-alanine ligase (NCBI: ZP_05729787.1)
    COG: Cell wall/membrane/envelope biogenesis
    Subcellular localization as predicted by Psort 2.0: Cytoplasmic

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013956.2 Reference assembly

    Range
    843271..844188
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_003519016.1 DdlB [Pantoea ananatis LMG 20103]

    Status: PROVISIONAL

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