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vapB27 antitoxin VapB27 [ Mycobacterium tuberculosis H37Rv ]

Gene ID: 887856, updated on 6-Oct-2023
Gene symbol
vapB27
Gene description
antitoxin VapB27
Locus tag
Rv0599c
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
Lineage
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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Sequence:
NC_000962.3 (697564..697800, complement)

NC_000962.3Genomic Context describing neighboring genes Neighboring gene ribonuclease VapC4 Neighboring gene antitoxin VapB4 Neighboring gene hypothetical protein Neighboring gene ribonuclease VapC27 Neighboring gene two component sensor kinase HK1 Neighboring gene two component sensor kinase HK2

Genomic Sequence:
NC_000962.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
  2. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
  3. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
antitoxin VapB27
NP_215113.1
  • part of toxin-antitoxin (TA) operon with Rv0598c. This region is a possible MT-complex-specific genomic island (See Becq et al., 2007 PMID:17545187).

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000962.3 Reference assembly

    Range
    697564..697800 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_215113.1 antitoxin VapB27 [Mycobacterium tuberculosis H37Rv]

    See identical proteins and their annotated locations for NP_215113.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    R4LSI4
    Conserved Domains (1) summary
    COG2002
    Location:1 → 77
    AbrB; Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module [Transcription, Defense mechanisms]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O07779.3

Gene LinkOut

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Molecular Biology Databases