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vapC22 ribonuclease VapC22 [ Mycobacterium tuberculosis H37Rv ]

Gene ID: 887730, updated on 6-Oct-2023

Summary

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Gene symbol
vapC22
Gene description
ribonuclease VapC22
Locus tag
Rv2829c
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
Lineage
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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Genomic context

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Sequence:
NC_000962.3 (3136620..3137012, complement)

NC_000962.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene antitoxin VapB22 Neighboring gene enoyl-CoA hydratase EchA16 Neighboring gene sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC Neighboring gene sn-glycerol-3-phosphate ABC transporter substrate-binding lipoprotein UgpB

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000962.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
  2. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
  3. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
ribonuclease VapC22
NP_217345.1
  • toxin, part of toxin-antitoxin (TA) operon with Rv2830c, contains PIN domain

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000962.3 Reference assembly

    Range
    3136620..3137012 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_217345.1 ribonuclease VapC22 [Mycobacterium tuberculosis H37Rv]

    See identical proteins and their annotated locations for NP_217345.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    R4M991
    Conserved Domains (1) summary
    COG3744
    Location:1 → 128
    COG3744; PIN domain nuclease, a component of toxin-antitoxin system (PIN domain) [Defense mechanisms]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P71623.1

Gene LinkOut

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Molecular Biology Databases
Research Materials