NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_050645.1 RefSeqGene
- Range
-
5001..24590
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001242350.3 → NP_001229279.2 vascular non-inflammatory molecule 2 isoform 3 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks two alternate in-frame exons in the coding region, compared to variant 1. The resulting protein (isoform 3) is shorter but has the same N- and C-termini compared to isoform 1.
- Source sequence(s)
-
AL032821
- Consensus CDS
-
CCDS56451.1
- Related
- ENSP00000436935.1, ENST00000525289.5
-
NM_004665.6 → NP_004656.3 vascular non-inflammatory molecule 2 isoform 1 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AL032821
- Consensus CDS
-
CCDS5161.1
- Related
- ENSP00000322276.6, ENST00000326499.11
-
NM_078488.3 → NP_511043.2 vascular non-inflammatory molecule 2 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, lacks a portion of the 5' coding region, and initiates translation at a downstream codon, compared to variant 1. This results in a shorter protein (isoform 2), compared to isoform 1.
- Source sequence(s)
-
AL032821
- Consensus CDS
-
CCDS5162.1
- Related
- ENSP00000436822.1, ENST00000525270.5
RNA
-
NR_034173.3 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an alternate 5' exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AL032821
-
NR_034174.3 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks an alternate 5' exon and uses an alternate splice site, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AL032821
-
NR_110143.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (8) uses an alternate internal splice site, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AL032821
- Related
-
ENST00000392389.6
-
NR_110144.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (9) uses an alternate internal splice site, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AL032821
- Related
-
ENST00000418593.6
-
NR_110145.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) contains an alternate 5' exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AL032821
-
NR_110146.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) lacks multiple consecutive exons, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AL032821
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p13 Primary Assembly
Genomic
-
NC_000006.12 Reference GRCh38.p13 Primary Assembly
- Range
-
132743503..132763489 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017011408.1 → XP_016866897.1 vascular non-inflammatory molecule 2 isoform X3
-
XM_017011409.1 → XP_016866898.1 vascular non-inflammatory molecule 2 isoform X3
-
XM_006715593.3 → XP_006715656.1 vascular non-inflammatory molecule 2 isoform X1
- UniProtKB/Swiss-Prot
-
O95498
- Conserved Domains (1) summary
-
- cd07567
Location:1 → 276
- biotinidase_like; biotinidase and vanins (class 4 nitrilases)
-
XM_011536231.1 → XP_011534533.1 vascular non-inflammatory molecule 2 isoform X2
- Conserved Domains (1) summary
-
- cd07567
Location:26 → 329
- biotinidase_like; biotinidase and vanins (class 4 nitrilases)
RNA
-
XR_002956311.1 RNA Sequence
- Related
-
ENST00000422400.6