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vapC46 ribonuclease VapC46 [ Mycobacterium tuberculosis H37Rv ]

Gene ID: 887432, updated on 6-Oct-2023
Gene symbol
vapC46
Gene description
ribonuclease VapC46
Locus tag
Rv3384c
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
Lineage
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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Sequence:
NC_000962.3 (3799243..3799635, complement)

NC_000962.3Genomic Context describing neighboring genes Neighboring gene 1-deoxy-D-xylulose-5-phosphate synthase Neighboring gene 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Neighboring gene polyprenyl synthetase IdsB Neighboring gene antitoxin VapB46 Neighboring gene transposase Neighboring gene transposase Neighboring gene PE-PGRS family protein PE_PGRS52

Genomic Sequence:
NC_000962.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
  2. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
  3. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
ribonuclease VapC46
NP_217901.1
  • toxin, part of toxin-antitoxin (TA) operon with Rv3385c,contains PIN domain

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000962.3 Reference assembly

    Range
    3799243..3799635 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_217901.1 ribonuclease VapC46 [Mycobacterium tuberculosis H37Rv]

    See identical proteins and their annotated locations for NP_217901.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q7D5L4
    Conserved Domains (1) summary
    cd09874
    Location:4 → 126
    PIN_MT3492-like; VapC-like PIN domain of the hypothetical protein MT3492 of Mycobacterium tuberculosis CDC1551 and other uncharacterized, annotated PilT protein domain proteins
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O50411.3

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